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Analysis

See an overview of the database

Number of tools over time

Publication status

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Cite us

Zappia L, Phipson B, Oshlack A. "Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database", PLOS Computational Biology (2018), DOI: 10.1371/journal.pcbi.1006245

About scRNA-tools

The scRNA-tools database is a catalogue of software packages for analysing single-cell RNA sequencing data. It was created by the Oshlack Lab, a bioinformatics research group based in Melbourne, Australia and is now maintained at the Institute of Computational Biology in Munich, Germany and by a team of volunteers around the world. Contact us here.

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Since May 2024 scRNA-tools has been in low-maintenance mode. Read more about what this means here.